IL_7NWG_335

3D structure

PDB id

7NWG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with Hybrid P/E- and A/P-site tRNA's bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGACGGA*UUGUACA

Length

14 nucleotides

Bulged bases

7NWG|1|A2|G|1207, 7NWG|1|A2|A|1695

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWG|1|A2|U|1202
7NWG|1|A2|G|1203
7NWG|1|A2|A|1204
7NWG|1|A2|C|1205
7NWG|1|A2|G|1206
7NWG|1|A2|G|1207
7NWG|1|A2|A|1208
*
7NWG|1|A2|U|1691
7NWG|1|A2|U|1692
7NWG|1|A2|G|1693
7NWG|1|A2|U|1694
7NWG|1|A2|A|1695
7NWG|1|A2|C|1696
7NWG|1|A2|A|1697

Current chains

Chain A2

18S Ribosomal RNA

Nearby chains

Chain D2

40S ribosomal protein S2

Chain b2

40S ribosomal protein S26

Chain v3

mRNA