IL_7NWH_007

3D structure

PDB id

7NWH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.

Experimental method

ELECTRON MICROSCOPY

Resolution

4.1 Å

Loop

Sequence

CGAAU*AAAUGUG

Length

12 nucleotides

Bulged bases

7NWH|1|5|G|119, 7NWH|1|5|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7NWH|1|5|C|118
7NWH|1|5|G|119
7NWH|1|5|A|120
7NWH|1|5|A|121
7NWH|1|5|U|122
*
7NWH|1|5|A|147
7NWH|1|5|A|148
7NWH|1|5|A|149
7NWH|1|5|U|150
7NWH|1|5|G|151
7NWH|1|5|U|152
7NWH|1|5|G|153

Current chains

Chain 5

28S Ribosomal RNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain G

L7a

Chain N

Ribosomal protein L15

Chain h

uL29