IL_7NWH_077
3D structure
- PDB id
- 7NWH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- CGC*GGUG
- Length
- 7 nucleotides
- Bulged bases
- 7NWH|1|5|G|2343
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWH_077 not in the Motif Atlas
- Homologous match to IL_8C3A_061
- Geometric discrepancy: 0.151
- The information below is about IL_8C3A_061
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73554.3
- Basepair signature
- cWW-cWS-cWW
- Number of instances in this motif group
- 10
Unit IDs
7NWH|1|5|C|2290
7NWH|1|5|G|2291
7NWH|1|5|C|2292
*
7NWH|1|5|G|2342
7NWH|1|5|G|2343
7NWH|1|5|U|2344
7NWH|1|5|G|2345
Current chains
- Chain 5
- 28S Ribosomal RNA
Nearby chains
- Chain 8
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain C
- uL4
- Chain a
- 60S ribosomal protein L27a
- Chain e
- Ribosomal protein L32
- Chain r
- eL28
Coloring options: