IL_7NWH_185
3D structure
- PDB id
- 7NWH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- CAU*AAG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWH_185 not in the Motif Atlas
- Homologous match to IL_4V88_406
- Geometric discrepancy: 0.3526
- The information below is about IL_4V88_406
- Detailed Annotation
- Isolated near basepair
- Broad Annotation
- Isolated near basepair
- Motif group
- IL_76004.2
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 18
Unit IDs
7NWH|1|9|C|459
7NWH|1|9|A|460
7NWH|1|9|U|461
*
7NWH|1|9|A|468
7NWH|1|9|A|469
7NWH|1|9|G|470
Current chains
- Chain 9
- 18S Ribosomal RNA
Nearby chains
- Chain GG
- 40S ribosomal protein S6
- Chain V
- eL14
- Chain ii
- Eukaryotic peptide chain release factor subunit 1
- Chain jj
- eRF3a
Coloring options: