IL_7NWH_262
3D structure
- PDB id
- 7NWH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- GGAAGUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- 7NWH|1|5|G|3839
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWH_262 not in the Motif Atlas
- Homologous match to IL_8P9A_305
- Geometric discrepancy: 0.145
- The information below is about IL_8P9A_305
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.1
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 10
Unit IDs
7NWH|1|5|G|2847
7NWH|1|5|G|2848
7NWH|1|5|A|2849
7NWH|1|5|A|2850
7NWH|1|5|G|2851
7NWH|1|5|U|2852
7NWH|1|5|C|2853
7NWH|1|5|G|2854
7NWH|1|5|G|2855
*
7NWH|1|5|C|3837
7NWH|1|5|U|3838
7NWH|1|5|G|3839
7NWH|1|5|U|3840
7NWH|1|5|C|3841
Current chains
- Chain 5
- 28S Ribosomal RNA
Nearby chains
- Chain B
- uL3
- Chain V
- eL14
Coloring options: