IL_7NWH_274
3D structure
- PDB id
- 7NWH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with eRF1 and eRF3 bound by Blasticidin S.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.1 Å
Loop
- Sequence
- UGGC*GUCUGUGA
- Length
- 12 nucleotides
- Bulged bases
- 7NWH|1|9|U|1494, 7NWH|1|9|G|1497
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWH_274 not in the Motif Atlas
- Homologous match to IL_8C3A_457
- Geometric discrepancy: 0.4261
- The information below is about IL_8C3A_457
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_55620.1
- Basepair signature
- cWW-L-tHS-L-R-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
7NWH|1|9|U|1333
7NWH|1|9|G|1334
7NWH|1|9|G|1335
7NWH|1|9|C|1336
*
7NWH|1|9|G|1491
7NWH|1|9|U|1492
7NWH|1|9|C|1493
7NWH|1|9|U|1494
7NWH|1|9|G|1495
7NWH|1|9|U|1496
7NWH|1|9|G|1497
7NWH|1|9|A|1498
Current chains
- Chain 9
- 18S Ribosomal RNA
Nearby chains
- Chain DD
- 40S ribosomal protein S3
- Chain KK
- 40S ribosomal protein S10
- Chain UU
- 40S ribosomal protein S20
- Chain dd
- S29
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