IL_7NWI_213
3D structure
- PDB id
- 7NWI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Mammalian pre-termination 80S ribosome with Empty-A site bound by Blasticidin S
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- GAC*GGC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWI_213 not in the Motif Atlas
- Geometric match to IL_5UNE_009
- Geometric discrepancy: 0.2074
- The information below is about IL_5UNE_009
- Detailed Annotation
- Isolated non-canonical cWW contact
- Broad Annotation
- No text annotation
- Motif group
- IL_44465.1
- Basepair signature
- cWW-L-R-cWW
- Number of instances in this motif group
- 9
Unit IDs
7NWI|1|9|G|874
7NWI|1|9|A|875
7NWI|1|9|C|876
*
7NWI|1|9|G|909
7NWI|1|9|G|910
7NWI|1|9|C|911
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain HH
- ribosomal protein eS7
- Chain R
- 60S ribosomal protein L19
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