IL_7NWT_016
3D structure
- PDB id
- 7NWT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.66 Å
Loop
- Sequence
- GAAAC*GAGAUAGC
- Length
- 13 nucleotides
- Bulged bases
- 7NWT|1|1|G|801, 7NWT|1|1|G|805
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7NWT_016 not in the Motif Atlas
- Homologous match to IL_5J7L_260
- Geometric discrepancy: 0.0564
- The information below is about IL_5J7L_260
- Detailed Annotation
- tHW-tHW cross-strand stack
- Broad Annotation
- No text annotation
- Motif group
- IL_54041.2
- Basepair signature
- cWW-L-R-L-R-tWH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
7NWT|1|1|G|674
7NWT|1|1|A|675
7NWT|1|1|A|676
7NWT|1|1|A|677
7NWT|1|1|C|678
*
7NWT|1|1|G|799
7NWT|1|1|A|800
7NWT|1|1|G|801
7NWT|1|1|A|802
7NWT|1|1|U|803
7NWT|1|1|A|804
7NWT|1|1|G|805
7NWT|1|1|C|806
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
Coloring options: