IL_7NWT_051

3D structure

PDB id

7NWT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.66 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

7NWT|1|1|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NWT_051 not in the Motif Atlas

Homologous match to IL_7RQB_055

Geometric discrepancy: 0.0816

The information below is about IL_7RQB_055

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_89002.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

20

Unit IDs

7NWT|1|1|C|1417
7NWT|1|1|G|1418
7NWT|1|1|A|1419
7NWT|1|1|A|1420
7NWT|1|1|G|1421
*
7NWT|1|1|C|1577
7NWT|1|1|U|1578
7NWT|1|1|A|1579
7NWT|1|1|A|1580
7NWT|1|1|G|1581

Current chains

Chain 1

23S ribosomal RNA

Nearby chains