IL_7NWW_084

3D structure

PDB id

7NWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

GAUG*CUUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NWW_084 not in the Motif Atlas

Geometric match to IL_4K27_002

Geometric discrepancy: 0.3911

The information below is about IL_4K27_002

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_77658.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

34

Unit IDs

7NWW|1|1|G|2107
7NWW|1|1|A|2108
7NWW|1|1|U|2109
7NWW|1|1|G|2110
*
7NWW|1|1|C|2179
7NWW|1|1|U|2180
7NWW|1|1|U|2181
7NWW|1|1|U|2182

Current chains

Chain 1

23S rRNA

Nearby chains