IL_7NWW_186

3D structure

PDB id

7NWW (explore in PDB, NAKB, or RNA 3D Hub)

Description

CspA-27 cotranslational folding intermediate 1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.05 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7NWW_186 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.064

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7NWW|1|1|U|1851
7NWW|1|1|U|1852
7NWW|1|1|A|1853
7NWW|1|1|A|1854
7NWW|1|1|U|1855
7NWW|1|1|U|1856
7NWW|1|1|G|1857
7NWW|1|1|A|1858
7NWW|1|1|U|1859
7NWW|1|1|G|1860
*
7NWW|1|1|U|1882
7NWW|1|1|U|1883
7NWW|1|1|G|1884
7NWW|1|1|A|1885
7NWW|1|1|U|1886
7NWW|1|1|C|1887
7NWW|1|1|G|1888
7NWW|1|1|A|1889
7NWW|1|1|A|1890
7NWW|1|1|G|1891

Current chains

Chain 1

23S rRNA

Nearby chains