IL_7O19_028

3D structure

PDB id

7O19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

7O19|1|AA|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O19_028 not in the Motif Atlas

Homologous match to IL_5J7L_026

Geometric discrepancy: 0.0956

The information below is about IL_5J7L_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_38186.6

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

4

Unit IDs

7O19|1|AA|C|569
7O19|1|AA|G|570
7O19|1|AA|U|571
7O19|1|AA|A|572
7O19|1|AA|A|573
7O19|1|AA|A|574
7O19|1|AA|G|575
*
7O19|1|AA|C|880
7O19|1|AA|G|881

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AL

30S ribosomal protein S12

Chain AQ

30S ribosomal protein S17