IL_7O19_056

3D structure

PDB id

7O19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUGC*GAGGAAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O19_056 not in the Motif Atlas

Geometric match to IL_5J7L_053

Geometric discrepancy: 0.1424

The information below is about IL_5J7L_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_42032.1

Basepair signature

cWW-cSH-cWW-tWH-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

7O19|1|AA|C|1158
7O19|1|AA|U|1159
7O19|1|AA|G|1160
7O19|1|AA|C|1161
*
7O19|1|AA|G|1175
7O19|1|AA|A|1176
7O19|1|AA|G|1177
7O19|1|AA|G|1178
7O19|1|AA|A|1179
7O19|1|AA|A|1180
7O19|1|AA|G|1181

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AB

30S ribosomal protein S2

Chain AI

30S ribosomal protein S9