3D structure

PDB id
7O19 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
CGACC*GCAAG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7O19_059 not in the Motif Atlas
Homologous match to IL_5J7L_056
Geometric discrepancy: 0.1383
The information below is about IL_5J7L_056
Detailed Annotation
Triple sheared
Broad Annotation
No text annotation
Motif group
IL_17948.2
Basepair signature
cWW-L-R-tSH-tHS-cWW
Number of instances in this motif group
13

Unit IDs

7O19|1|AA|C|1259
7O19|1|AA|G|1260
7O19|1|AA|A|1261
7O19|1|AA|C|1262
7O19|1|AA|C|1263
*
7O19|1|AA|G|1272
7O19|1|AA|C|1273
7O19|1|AA|A|1274
7O19|1|AA|A|1275
7O19|1|AA|G|1276

Current chains

Chain AA
Ribosomal RNA 16S

Nearby chains

Chain AN
30S ribosomal protein S14
Chain AS
30S ribosomal protein S19

Coloring options:


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