IL_7O19_059

3D structure

PDB id

7O19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGACC*GCAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O19_059 not in the Motif Atlas

Homologous match to IL_5J7L_056

Geometric discrepancy: 0.1383

The information below is about IL_5J7L_056

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_17948.2

Basepair signature

cWW-L-R-tSH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

7O19|1|AA|C|1259
7O19|1|AA|G|1260
7O19|1|AA|A|1261
7O19|1|AA|C|1262
7O19|1|AA|C|1263
*
7O19|1|AA|G|1272
7O19|1|AA|C|1273
7O19|1|AA|A|1274
7O19|1|AA|A|1275
7O19|1|AA|G|1276

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AN

30S ribosomal protein S14

Chain AS

30S ribosomal protein S19