IL_7O19_132

3D structure

PDB id

7O19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGUAAC*GGAGAAG

Length

13 nucleotides

Bulged bases

7O19|1|BA|G|1699

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O19_132 not in the Motif Atlas

Homologous match to IL_5J7L_308

Geometric discrepancy: 0.0783

The information below is about IL_5J7L_308

Detailed Annotation

tSH-tSH-tHH-tHS

Broad Annotation

No text annotation

Motif group

IL_47346.2

Basepair signature

cWW-tSH-L-R-tHH-tHS-cWW

Number of instances in this motif group

7

Unit IDs

7O19|1|BA|C|1686
7O19|1|BA|G|1687
7O19|1|BA|U|1688
7O19|1|BA|A|1689
7O19|1|BA|A|1690
7O19|1|BA|C|1691
*
7O19|1|BA|G|1696
7O19|1|BA|G|1697
7O19|1|BA|A|1698
7O19|1|BA|G|1699
7O19|1|BA|A|1700
7O19|1|BA|A|1701
7O19|1|BA|G|1702

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain AA

Small subunit ribosomal RNA; SSU rRNA

Chain BC

50S ribosomal protein L2