3D structure

PDB id
7O19 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.9 Å

Loop

Sequence
AGG*CA(OMC)CU
Length
8 nucleotides
Bulged bases
None detected
QA status
Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7O19_160 not in the Motif Atlas
Homologous match to IL_5J7L_335
Geometric discrepancy: 0.0809
The information below is about IL_5J7L_335
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

7O19|1|BA|A|2453
7O19|1|BA|G|2454
7O19|1|BA|G|2455
*
7O19|1|BA|C|2496
7O19|1|BA|A|2497
7O19|1|BA|OMC|2498
7O19|1|BA|C|2499
7O19|1|BA|U|2500

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

Chain B5
Tryptophanase leader peptide
Chain BD
50S ribosomal protein L3
Chain BM
50S ribosomal protein L16

Coloring options:


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