IL_7O19_160

3D structure

PDB id

7O19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AGG*CA(OMC)CU

Length

8 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMC

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O19_160 not in the Motif Atlas

Homologous match to IL_5J7L_335

Geometric discrepancy: 0.0809

The information below is about IL_5J7L_335

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7O19|1|BA|A|2453
7O19|1|BA|G|2454
7O19|1|BA|G|2455
*
7O19|1|BA|C|2496
7O19|1|BA|A|2497
7O19|1|BA|OMC|2498
7O19|1|BA|C|2499
7O19|1|BA|U|2500

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain B5

Tryptophanase leader peptide

Chain BD

50S ribosomal protein L3

Chain BM

50S ribosomal protein L16