IL_7O19_162
3D structure
- PDB id
- 7O19 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- AUA*UGUUU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7O19_162 not in the Motif Atlas
- Homologous match to IL_5J7L_337
- Geometric discrepancy: 0.0927
- The information below is about IL_5J7L_337
- Detailed Annotation
- Major groove minor groove platform with extra cWW
- Broad Annotation
- Major groove minor groove platform with extra cWW
- Motif group
- IL_51387.3
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 21
Unit IDs
7O19|1|BA|A|2459
7O19|1|BA|U|2460
7O19|1|BA|A|2461
*
7O19|1|BA|U|2489
7O19|1|BA|G|2490
7O19|1|BA|U|2491
7O19|1|BA|U|2492
7O19|1|BA|U|2493
Current chains
- Chain BA
- Ribosomal RNA 23S
Nearby chains
- Chain BM
- 50S ribosomal protein L16
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