IL_7O19_189

3D structure

PDB id

7O19 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AAUUC*GUUAU

Length

10 nucleotides

Bulged bases

7O19|1|BA|U|931

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O19_189 not in the Motif Atlas

Geometric match to IL_5J7L_399

Geometric discrepancy: 0.1518

The information below is about IL_5J7L_399

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_96236.1

Basepair signature

cWW-tWW-cWW-L-cWW

Number of instances in this motif group

1

Unit IDs

7O19|1|BA|A|844
7O19|1|BA|A|845
7O19|1|BA|U|846
7O19|1|BA|U|847
7O19|1|BA|C|848
*
7O19|1|BA|G|930
7O19|1|BA|U|931
7O19|1|BA|U|932
7O19|1|BA|A|933
7O19|1|BA|U|934

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain BZ

50S ribosomal protein L30