IL_7O1A_012

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

7O1A|1|AA|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_012 not in the Motif Atlas

Homologous match to IL_5J7L_012

Geometric discrepancy: 0.1214

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

7O1A|1|AA|G|147
7O1A|1|AA|G|148
7O1A|1|AA|A|149
7O1A|1|AA|U|150
7O1A|1|AA|A|151
7O1A|1|AA|A|152
7O1A|1|AA|C|153
*
7O1A|1|AA|G|168
7O1A|1|AA|C|169
7O1A|1|AA|U|170
7O1A|1|AA|A|171
7O1A|1|AA|A|172
7O1A|1|AA|U|173
7O1A|1|AA|A|174
7O1A|1|AA|C|175

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AT

30S ribosomal protein S20