IL_7O1A_034

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UAGAG*UGGA

Length

9 nucleotides

Bulged bases

7O1A|1|AA|A|665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_034 not in the Motif Atlas

Homologous match to IL_5J7L_033

Geometric discrepancy: 0.079

The information below is about IL_5J7L_033

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_85033.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

7O1A|1|AA|U|662
7O1A|1|AA|A|663
7O1A|1|AA|G|664
7O1A|1|AA|A|665
7O1A|1|AA|G|666
*
7O1A|1|AA|U|740
7O1A|1|AA|G|741
7O1A|1|AA|G|742
7O1A|1|AA|A|743

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AF

30S ribosomal protein S6

Chain AO

30S ribosomal protein S15

Chain AR

30S ribosomal protein S18