IL_7O1A_037

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGGAG*UC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_037 not in the Motif Atlas

Homologous match to IL_4LFB_032

Geometric discrepancy: 0.0536

The information below is about IL_4LFB_032

Detailed Annotation

Left turn

Broad Annotation

Left turn

Motif group

IL_29346.2

Basepair signature

cWW-L-cWW-L-L

Number of instances in this motif group

3

Unit IDs

7O1A|1|AA|G|774
7O1A|1|AA|G|775
7O1A|1|AA|G|776
7O1A|1|AA|A|777
7O1A|1|AA|G|778
*
7O1A|1|AA|U|804
7O1A|1|AA|C|805

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AK

30S ribosomal protein S11

Chain BA

Large subunit ribosomal RNA; LSU rRNA

Chain BC

50S ribosomal protein L2