IL_7O1A_048

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UGCAU*AUG

Length

8 nucleotides

Bulged bases

7O1A|1|AA|C|1054

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_048 not in the Motif Atlas

Geometric match to IL_4LFB_044

Geometric discrepancy: 0.0667

The information below is about IL_4LFB_044

Detailed Annotation

Isolated cWS basepair

Broad Annotation

No text annotation

Motif group

IL_76319.5

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

3

Unit IDs

7O1A|1|AA|U|1052
7O1A|1|AA|G|1053
7O1A|1|AA|C|1054
7O1A|1|AA|A|1055
7O1A|1|AA|U|1056
*
7O1A|1|AA|A|1204
7O1A|1|AA|U|1205
7O1A|1|AA|G|1206

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AC

30S ribosomal protein S3

Chain AJ

30S ribosomal protein S10

Chain AN

30S ribosomal protein S14

Chain B7

mRNA