3D structure

PDB id
7O1A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
GG*UCAUC
Length
7 nucleotides
Bulged bases
7O1A|1|AA|C|1200, 7O1A|1|AA|A|1201
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7O1A_049 not in the Motif Atlas
Homologous match to IL_5J7L_048
Geometric discrepancy: 0.0779
The information below is about IL_5J7L_048
Detailed Annotation
Minor groove platform
Broad Annotation
No text annotation
Motif group
IL_95583.2
Basepair signature
cWW-L-cWW
Number of instances in this motif group
11

Unit IDs

7O1A|1|AA|G|1057
7O1A|1|AA|G|1058
*
7O1A|1|AA|U|1199
7O1A|1|AA|C|1200
7O1A|1|AA|A|1201
7O1A|1|AA|U|1202
7O1A|1|AA|C|1203

Current chains

Chain AA
Ribosomal RNA 16S

Nearby chains

Chain AC
30S ribosomal protein S3
Chain AJ
30S ribosomal protein S10
Chain AN
30S ribosomal protein S14

Coloring options:


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