3D structure

PDB id
7O1A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
GGG*CAAUC
Length
8 nucleotides
Bulged bases
7O1A|1|BA|G|776, 7O1A|1|BA|A|788, 7O1A|1|BA|A|789
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7O1A_087 not in the Motif Atlas
Homologous match to IL_5J7L_265
Geometric discrepancy: 0.0819
The information below is about IL_5J7L_265
Detailed Annotation
Multiple bulged bases
Broad Annotation
No text annotation
Motif group
IL_06549.2
Basepair signature
cWW-cWW
Number of instances in this motif group
6

Unit IDs

7O1A|1|BA|G|775
7O1A|1|BA|G|776
7O1A|1|BA|G|777
*
7O1A|1|BA|C|787
7O1A|1|BA|A|788
7O1A|1|BA|A|789
7O1A|1|BA|U|790
7O1A|1|BA|C|791

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

Chain B2
50S ribosomal protein L34
Chain B5
TnaC - Tryptophanase leader peptide - R23F
Chain BC
50S ribosomal protein L2
Chain BS
50S ribosomal protein L22

Coloring options:


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