IL_7O1A_118

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GAAG*CCUGC

Length

9 nucleotides

Bulged bases

7O1A|1|BA|U|1559

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_118 not in the Motif Atlas

Homologous match to IL_5J7L_296

Geometric discrepancy: 0.0951

The information below is about IL_5J7L_296

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_58112.2

Basepair signature

cWW-cWW-L-R-cWW

Number of instances in this motif group

4

Unit IDs

7O1A|1|BA|G|1432
7O1A|1|BA|A|1433
7O1A|1|BA|A|1434
7O1A|1|BA|G|1435
*
7O1A|1|BA|C|1557
7O1A|1|BA|C|1558
7O1A|1|BA|U|1559
7O1A|1|BA|G|1560
7O1A|1|BA|C|1561

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain BC

50S ribosomal protein L2