3D structure

PDB id
7O1A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
CUAU*AAAUG
Length
9 nucleotides
Bulged bases
7O1A|1|BA|U|1554
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7O1A_119 not in the Motif Atlas
Homologous match to IL_5J7L_297
Geometric discrepancy: 0.0658
The information below is about IL_5J7L_297
Detailed Annotation
tSH-tHW
Broad Annotation
No text annotation
Motif group
IL_99646.2
Basepair signature
cWW-tWH-tHS-cWW
Number of instances in this motif group
6

Unit IDs

7O1A|1|BA|C|1437
7O1A|1|BA|U|1438
7O1A|1|BA|A|1439
7O1A|1|BA|U|1440
*
7O1A|1|BA|A|1551
7O1A|1|BA|A|1552
7O1A|1|BA|A|1553
7O1A|1|BA|U|1554
7O1A|1|BA|G|1555

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

No other chains within 10Å

Coloring options:


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