IL_7O1A_121

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UAAG*UGAUG

Length

9 nucleotides

Bulged bases

7O1A|1|BA|U|1523

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_121 not in the Motif Atlas

Homologous match to IL_5J7L_299

Geometric discrepancy: 0.0801

The information below is about IL_5J7L_299

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_68574.4

Basepair signature

cWW-tHH-tHS-cWW

Number of instances in this motif group

3

Unit IDs

7O1A|1|BA|U|1468
7O1A|1|BA|A|1469
7O1A|1|BA|A|1470
7O1A|1|BA|G|1471
*
7O1A|1|BA|U|1520
7O1A|1|BA|G|1521
7O1A|1|BA|A|1522
7O1A|1|BA|U|1523
7O1A|1|BA|G|1524

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains