3D structure

PDB id
7O1A (explore in PDB, NAKB, or RNA 3D Hub)
Description
Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
Experimental method
ELECTRON MICROSCOPY
Resolution
2.4 Å

Loop

Sequence
CGAG*UGAAG
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_7O1A_125 not in the Motif Atlas
Homologous match to IL_5J7L_303
Geometric discrepancy: 0.0976
The information below is about IL_5J7L_303
Detailed Annotation
UAA/GAN variation
Broad Annotation
UAA/GAN variation
Motif group
IL_23774.1
Basepair signature
cWW-L-R-L-tHS-cWW
Number of instances in this motif group
11

Unit IDs

7O1A|1|BA|C|1526
7O1A|1|BA|G|1527
7O1A|1|BA|A|1528
7O1A|1|BA|G|1529
*
7O1A|1|BA|U|1542
7O1A|1|BA|G|1543
7O1A|1|BA|A|1544
7O1A|1|BA|A|1545
7O1A|1|BA|G|1546

Current chains

Chain BA
Ribosomal RNA 23S

Nearby chains

No other chains within 10Å

Coloring options:


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