IL_7O1A_155

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

AAU*AGGUU

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_155 not in the Motif Atlas

Homologous match to IL_5J7L_332

Geometric discrepancy: 0.1128

The information below is about IL_5J7L_332

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61476.2

Basepair signature

cWW-tSH-L-cWW-L

Number of instances in this motif group

7

Unit IDs

7O1A|1|BA|A|2297
7O1A|1|BA|A|2298
7O1A|1|BA|U|2299
*
7O1A|1|BA|A|2317
7O1A|1|BA|G|2318
7O1A|1|BA|G|2319
7O1A|1|BA|U|2320
7O1A|1|BA|U|2321

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain BB

5S ribosomal RNA; 5S rRNA

Chain BF

50S ribosomal protein L5

Chain BO

50S ribosomal protein L18