IL_7O1A_159
3D structure
- PDB id
- 7O1A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.4 Å
Loop
- Sequence
- C(PSU)GA*UGG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7O1A_159 not in the Motif Atlas
- Geometric match to IL_4KQY_003
- Geometric discrepancy: 0.3447
- The information below is about IL_4KQY_003
- Detailed Annotation
- Major groove platform with extra pair
- Broad Annotation
- Major groove platform
- Motif group
- IL_15698.3
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 10
Unit IDs
7O1A|1|BA|C|2456
7O1A|1|BA|PSU|2457
7O1A|1|BA|G|2458
7O1A|1|BA|A|2459
*
7O1A|1|BA|U|2493
7O1A|1|BA|G|2494
7O1A|1|BA|G|2495
Current chains
- Chain BA
- Ribosomal RNA 23S
Nearby chains
- Chain BM
- 50S ribosomal protein L16
Coloring options: