IL_7O1A_173

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GAUAAG*CGAAAC

Length

12 nucleotides

Bulged bases

7O1A|1|BA|A|2765

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_173 not in the Motif Atlas

Homologous match to IL_5J7L_350

Geometric discrepancy: 0.0549

The information below is about IL_5J7L_350

Detailed Annotation

UAA/GAN with extra cWW

Broad Annotation

No text annotation

Motif group

IL_49767.8

Basepair signature

cWW-cWW-tWH-L-tHS-cWW

Number of instances in this motif group

6

Unit IDs

7O1A|1|BA|G|2737
7O1A|1|BA|A|2738
7O1A|1|BA|U|2739
7O1A|1|BA|A|2740
7O1A|1|BA|A|2741
7O1A|1|BA|G|2742
*
7O1A|1|BA|C|2762
7O1A|1|BA|G|2763
7O1A|1|BA|A|2764
7O1A|1|BA|A|2765
7O1A|1|BA|A|2766
7O1A|1|BA|C|2767

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain B4

50S ribosomal protein L36

Chain BG

50S ribosomal protein L6

Chain BJ

50S ribosomal protein L13