IL_7O1A_190

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UUAAUUGAUG*UUGAUCGAAG

Length

20 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_190 not in the Motif Atlas

Homologous match to IL_5J7L_387

Geometric discrepancy: 0.0639

The information below is about IL_5J7L_387

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_61249.1

Basepair signature

cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW

Number of instances in this motif group

1

Unit IDs

7O1A|1|BA|U|1851
7O1A|1|BA|U|1852
7O1A|1|BA|A|1853
7O1A|1|BA|A|1854
7O1A|1|BA|U|1855
7O1A|1|BA|U|1856
7O1A|1|BA|G|1857
7O1A|1|BA|A|1858
7O1A|1|BA|U|1859
7O1A|1|BA|G|1860
*
7O1A|1|BA|U|1882
7O1A|1|BA|U|1883
7O1A|1|BA|G|1884
7O1A|1|BA|A|1885
7O1A|1|BA|U|1886
7O1A|1|BA|C|1887
7O1A|1|BA|G|1888
7O1A|1|BA|A|1889
7O1A|1|BA|A|1890
7O1A|1|BA|G|1891

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains