IL_7O1A_192

3D structure

PDB id

7O1A (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

UUG*UGA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1A_192 not in the Motif Atlas

Geometric match to IL_5MSF_001

Geometric discrepancy: 0.2144

The information below is about IL_5MSF_001

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

7O1A|1|BA|U|2098
7O1A|1|BA|U|2099
7O1A|1|BA|G|2100
*
7O1A|1|BA|U|2189
7O1A|1|BA|G|2190
7O1A|1|BA|A|2191

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains

Chain BH

50S ribosomal protein L9