IL_7O1C_029

3D structure

PDB id

7O1C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

CGUAAAG*CG

Length

9 nucleotides

Bulged bases

7O1C|1|AA|A|572

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1C_029 not in the Motif Atlas

Homologous match to IL_4LFB_022

Geometric discrepancy: 0.0827

The information below is about IL_4LFB_022

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_20847.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

5

Unit IDs

7O1C|1|AA|C|569
7O1C|1|AA|G|570
7O1C|1|AA|U|571
7O1C|1|AA|A|572
7O1C|1|AA|A|573
7O1C|1|AA|A|574
7O1C|1|AA|G|575
*
7O1C|1|AA|C|880
7O1C|1|AA|G|881

Current chains

Chain AA

Ribosomal RNA 16S

Nearby chains

Chain AL

30S ribosomal protein S12

Chain AQ

30S ribosomal protein S17