IL_7O1C_154

3D structure

PDB id

7O1C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophan

Experimental method

ELECTRON MICROSCOPY

Resolution

2.6 Å

Loop

Sequence

GGAGG*CCGACCUUGAAAUAC

Length

20 nucleotides

Bulged bases

7O1C|1|BA|G|2168, 7O1C|1|BA|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O1C_154 not in the Motif Atlas

Homologous match to IL_5J7L_329

Geometric discrepancy: 0.461

The information below is about IL_5J7L_329

Detailed Annotation

Kink-turn related

Broad Annotation

No text annotation

Motif group

IL_87290.1

Basepair signature

cWW-L-R-L-R-L-R-L-R-L-R-L-R-L-R-L

Number of instances in this motif group

1

Unit IDs

7O1C|1|BA|G|2124
7O1C|1|BA|G|2125
7O1C|1|BA|A|2126
7O1C|1|BA|G|2127
7O1C|1|BA|G|2128
*
7O1C|1|BA|C|2160
7O1C|1|BA|C|2161
7O1C|1|BA|G|2162
7O1C|1|BA|A|2163
7O1C|1|BA|C|2164
7O1C|1|BA|C|2165
7O1C|1|BA|U|2166
7O1C|1|BA|U|2167
7O1C|1|BA|G|2168
7O1C|1|BA|A|2169
7O1C|1|BA|A|2170
7O1C|1|BA|A|2171
7O1C|1|BA|U|2172
7O1C|1|BA|A|2173
7O1C|1|BA|C|2174

Current chains

Chain BA

Ribosomal RNA 23S

Nearby chains