IL_7O5B_033
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- GGGAG*UC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7O5B_033 not in the Motif Atlas
- Homologous match to IL_4LFB_032
- Geometric discrepancy: 0.1013
- The information below is about IL_4LFB_032
- Detailed Annotation
- Left turn
- Broad Annotation
- Left turn
- Motif group
- IL_29346.3
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 3
Unit IDs
7O5B|1|A|G|783
7O5B|1|A|G|784
7O5B|1|A|G|785
7O5B|1|A|A|786
7O5B|1|A|G|787
*
7O5B|1|A|U|813
7O5B|1|A|C|814
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain K
- 30S ribosomal protein S11
- Chain X
- Large subunit ribosomal RNA; LSU rRNA
- Chain Z
- 50S ribosomal protein L2
Coloring options: