IL_7O5B_047
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- GUUG*CACUC
- Length
- 9 nucleotides
- Bulged bases
- 7O5B|1|A|U|1136
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7O5B_047 not in the Motif Atlas
- Homologous match to IL_6CZR_158
- Geometric discrepancy: 0.3434
- The information below is about IL_6CZR_158
- Detailed Annotation
- Minor groove platform
- Broad Annotation
- Minor groove platform
- Motif group
- IL_40144.1
- Basepair signature
- cWW-L-R-L-cWW-L
- Number of instances in this motif group
- 1
Unit IDs
7O5B|1|A|G|1134
7O5B|1|A|U|1135
7O5B|1|A|U|1136
7O5B|1|A|G|1137
*
7O5B|1|A|C|1154
7O5B|1|A|A|1155
7O5B|1|A|C|1156
7O5B|1|A|U|1157
7O5B|1|A|C|1158
Current chains
- Chain A
- 16S rRNA (1533-MER)
Nearby chains
- Chain I
- 30S ribosomal protein S9
- Chain J
- 30S ribosomal protein S10
Coloring options: