IL_7O5B_119
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- CUAAG*CGAAG
- Length
- 10 nucleotides
- Bulged bases
- 7O5B|1|X|A|1202
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7O5B_119 not in the Motif Atlas
- Homologous match to IL_7A0S_033
- Geometric discrepancy: 0.1232
- The information below is about IL_7A0S_033
- Detailed Annotation
- UAA/GAN
- Broad Annotation
- No text annotation
- Motif group
- IL_08938.2
- Basepair signature
- cWW-tWH-L-tHS-cWW
- Number of instances in this motif group
- 25
Unit IDs
7O5B|1|X|C|1044
7O5B|1|X|U|1045
7O5B|1|X|A|1046
7O5B|1|X|A|1047
7O5B|1|X|G|1048
*
7O5B|1|X|C|1199
7O5B|1|X|G|1200
7O5B|1|X|A|1201
7O5B|1|X|A|1202
7O5B|1|X|G|1203
Current chains
- Chain X
- 23S rRNA (2887-MER)
Nearby chains
- Chain Y
- 5S ribosomal RNA; 5S rRNA
- Chain n
- 50S ribosomal protein L20
- Chain o
- 50S ribosomal protein L21
- Chain x
- 50S ribosomal protein L30
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