IL_7O5B_129
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- CUGUGAAG*UGGAG
- Length
- 13 nucleotides
- Bulged bases
- 7O5B|1|X|U|1251
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7O5B_129 not in the Motif Atlas
- Homologous match to IL_7RQB_047
- Geometric discrepancy: 0.1281
- The information below is about IL_7RQB_047
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_70923.2
- Basepair signature
- cWW-tSS-tSH-L-tHS-tHS-cWW
- Number of instances in this motif group
- 28
Unit IDs
7O5B|1|X|C|1248
7O5B|1|X|U|1249
7O5B|1|X|G|1250
7O5B|1|X|U|1251
7O5B|1|X|G|1252
7O5B|1|X|A|1253
7O5B|1|X|A|1254
7O5B|1|X|G|1255
*
7O5B|1|X|U|1274
7O5B|1|X|G|1275
7O5B|1|X|G|1276
7O5B|1|X|A|1277
7O5B|1|X|G|1278
Current chains
- Chain X
- 23S rRNA (2887-MER)
Nearby chains
- Chain n
- 50S ribosomal protein L20
Coloring options: