IL_7O5B_174
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7O5B_174 not in the Motif Atlas
- Homologous match to IL_4WF9_087
- Geometric discrepancy: 0.1079
- The information below is about IL_4WF9_087
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.3
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 47
Unit IDs
7O5B|1|X|C|2379
7O5B|1|X|G|2380
7O5B|1|X|A|2381
7O5B|1|X|G|2382
*
7O5B|1|X|C|2393
7O5B|1|X|G|2394
7O5B|1|X|A|2395
7O5B|1|X|G|2396
Current chains
- Chain X
- 23S rRNA (2887-MER)
Nearby chains
- Chain 3
- 50S ribosomal protein L35
- Chain u
- 50S ribosomal protein L27
Coloring options: