IL_7O5B_220
3D structure
- PDB id
- 7O5B (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of a Bacillus subtilis MifM-stalled ribosome-nascent chain complex with (p)ppGpp-SRP bound
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- GGAACUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7O5B_220 not in the Motif Atlas
- Homologous match to IL_4WF9_117
- Geometric discrepancy: 0.1278
- The information below is about IL_4WF9_117
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.2
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 11
Unit IDs
7O5B|1|X|G|1711
7O5B|1|X|G|1712
7O5B|1|X|A|1713
7O5B|1|X|A|1714
7O5B|1|X|C|1715
7O5B|1|X|U|1716
7O5B|1|X|C|1717
7O5B|1|X|G|1718
7O5B|1|X|G|1719
*
7O5B|1|X|C|2019
7O5B|1|X|U|2020
7O5B|1|X|G|2021
7O5B|1|X|U|2022
7O5B|1|X|C|2023
Current chains
- Chain X
- 23S rRNA (2887-MER)
Nearby chains
- Chain a
- 50S ribosomal protein L3
- Chain f
- 50S ribosomal protein L14
Coloring options: