IL_7O5H_013

3D structure

PDB id

7O5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal methyltransferase KsgA bound to small ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGAC*GC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O5H_013 not in the Motif Atlas

Geometric match to IL_3MXH_005

Geometric discrepancy: 0.2996

The information below is about IL_3MXH_005

Detailed Annotation

Minor groove platform

Broad Annotation

No text annotation

Motif group

IL_87975.1

Basepair signature

cWW-L-cWW-L

Number of instances in this motif group

10

Unit IDs

7O5H|1|A|G|203
7O5H|1|A|G|204
7O5H|1|A|A|205
7O5H|1|A|C|206
*
7O5H|1|A|G|213
7O5H|1|A|C|214

Current chains

Chain A

16S rRNA

Nearby chains