IL_7O5H_018

3D structure

PDB id

7O5H (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosomal methyltransferase KsgA bound to small ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

ACAAU*AU

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O5H_018 not in the Motif Atlas

Geometric match to IL_5J7L_018

Geometric discrepancy: 0.0852

The information below is about IL_5J7L_018

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_03109.3

Basepair signature

cWW-cWS-tWH-cWW-L

Number of instances in this motif group

6

Unit IDs

7O5H|1|A|A|371
7O5H|1|A|C|372
7O5H|1|A|A|373
7O5H|1|A|A|374
7O5H|1|A|U|375
*
7O5H|1|A|A|389
7O5H|1|A|U|390

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16