IL_7O80_168

3D structure

PDB id

7O80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUCGCAACCCCG*CG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7O80|1|B5|C|1649
7O80|1|B5|U|1650
7O80|1|B5|C|1651
7O80|1|B5|G|1652
7O80|1|B5|C|1653
7O80|1|B5|A|1654
7O80|1|B5|A|1655
7O80|1|B5|C|1656
7O80|1|B5|C|1657
7O80|1|B5|C|1658
7O80|1|B5|C|1659
7O80|1|B5|G|1660
*
7O80|1|B5|C|1780
7O80|1|B5|G|1781

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BC

60S ribosomal protein L4

Chain BF

Ribosomal Protein uL30

Chain BQ

Ribosomal protein L18

Chain BT

eL21

Chain Bb

60S ribosomal protein L29