IL_7O80_253
3D structure
- PDB id
- 7O80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CU*AACG
- Length
- 6 nucleotides
- Bulged bases
- 7O80|1|B5|A|4264, 7O80|1|B5|C|4265
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_7O80_253 not in the Motif Atlas
- Geometric match to IL_5TBW_109
- Geometric discrepancy: 0.1119
- The information below is about IL_5TBW_109
- Detailed Annotation
- Multiple bulged bases
- Broad Annotation
- No text annotation
- Motif group
- IL_24807.2
- Basepair signature
- cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
7O80|1|B5|C|4204
7O80|1|B5|U|4205
*
7O80|1|B5|A|4263
7O80|1|B5|A|4264
7O80|1|B5|C|4265
7O80|1|B5|G|4266
Current chains
- Chain B5
- 28S rRNA
Nearby chains
- Chain BB
- Ribosomal protein L3
- Chain BO
- Ribosomal protein L13a
- Chain BV
- Ribosomal protein L23
- Chain By
- Eukaryotic peptide chain release factor subunit 1
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