IL_7O80_318
3D structure
- PDB id
- 7O80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCUCAGCGUG*CCGUUGAACCC
- Length
- 21 nucleotides
- Bulged bases
- 7O80|1|A2|U|1586, 7O80|1|A2|G|1588
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
7O80|1|A2|G|1542
7O80|1|A2|C|1543
7O80|1|A2|U|1544
7O80|1|A2|C|1545
7O80|1|A2|A|1546
7O80|1|A2|G|1547
7O80|1|A2|C|1548
7O80|1|A2|G|1549
7O80|1|A2|U|1550
7O80|1|A2|G|1551
*
7O80|1|A2|C|1583
7O80|1|A2|C|1584
7O80|1|A2|G|1585
7O80|1|A2|U|1586
7O80|1|A2|U|1587
7O80|1|A2|G|1588
7O80|1|A2|A|1589
7O80|1|A2|A|1590
7O80|1|A2|C|1591
7O80|1|A2|C|1592
7O80|1|A2|C|1593
Current chains
- Chain A2
- 18S rRNA
Nearby chains
- Chain AG
- uS14
- Chain Ac
- 40S ribosomal protein S3
- Chain Ae
- Ribosomal protein S5
- Chain Ap
- Ribosomal protein S16
- Chain As
- Ribosomal protein eS19
- Chain At
- 40S ribosomal protein uS10
- Chain Ay
- 40S ribosomal protein S25
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