IL_7O80_326

3D structure

PDB id

7O80 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit 80S ribosome in complex with eRF1 and ABCE1 stalled at the STOP codon in the mutated SARS-CoV-2 slippery site

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

7O80|1|B5|G|1303, 7O80|1|B5|C|1322

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

7O80|1|B5|C|1301
7O80|1|B5|G|1302
7O80|1|B5|G|1303
7O80|1|B5|G|1304
7O80|1|B5|G|1305
*
7O80|1|B5|C|1320
7O80|1|B5|G|1321
7O80|1|B5|C|1322
7O80|1|B5|C|1323
7O80|1|B5|G|1324
7O80|1|B5|U|1325
7O80|1|B5|G|1326

Current chains

Chain B5

28S rRNA

Nearby chains

Chain BC

60S ribosomal protein L4

Chain BL

Ribosomal protein eL13

Chain BN

Ribosomal protein L15

Chain Ba

60S ribosomal protein L27a