IL_7O9K_019

3D structure

PDB id

7O9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human mitochondrial ribosome large subunit assembly intermediate with MTERF4-NSUN4, MRM2, MTG1, the MALSU module, GTPBP5 and mtEF-Tu

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GUAG*CACC

Length

8 nucleotides

Bulged bases

7O9K|1|A|A|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7O9K_019 not in the Motif Atlas

Geometric match to IL_5D8H_002

Geometric discrepancy: 0.3353

The information below is about IL_5D8H_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28482.1

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

7O9K|1|A|G|2170
7O9K|1|A|U|2171
7O9K|1|A|A|2172
7O9K|1|A|G|2173
*
7O9K|1|A|C|2187
7O9K|1|A|A|2188
7O9K|1|A|C|2189
7O9K|1|A|C|2190

Current chains

Chain A

16S rRNA

Nearby chains

Chain J

39S ribosomal protein L11, mitochondrial

Chain l

39S ribosomal protein L54, mitochondrial