IL_7OBR_001

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CAG*CCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OBR_001 not in the Motif Atlas

Geometric match to IL_6OL3_002

Geometric discrepancy: 0.1319

The information below is about IL_6OL3_002

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_87907.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

179

Unit IDs

7OBR|1|1|C|52
7OBR|1|1|A|53
7OBR|1|1|G|54
*
7OBR|1|1|C|292
7OBR|1|1|C|293
7OBR|1|1|G|294

Current chains

Chain 1

SRP RNA

Nearby chains

Chain w

Signal recognition particle 9 kDa protein