IL_7OBR_008

3D structure

PDB id

7OBR (explore in PDB, NAKB, or RNA 3D Hub)

Description

RNC-SRP early complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CGC*GG

Length

5 nucleotides

Bulged bases

7OBR|1|1|G|113

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_7OBR_008 not in the Motif Atlas

Geometric match to IL_5TBW_037

Geometric discrepancy: 0.2796

The information below is about IL_5TBW_037

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.7

Basepair signature

cWW-L-cWW

Number of instances in this motif group

49

Unit IDs

7OBR|1|1|C|112
7OBR|1|1|G|113
7OBR|1|1|C|114
*
7OBR|1|1|G|237
7OBR|1|1|G|238

Current chains

Chain 1

SRP RNA

Nearby chains

Chain 5

Large subunit ribosomal RNA; LSU rRNA

Chain z

Signal recognition particle subunit SRP72